2019

Thrash A, Arick II M, Barbato RA, Jones RM, Douglas TA, Esdale J, et al. Keanu: a novel visualization tool to explore biodiversity in metagenomes. BMC Bioinformatics. 2019;20. doi:10.1186/s12859-019-2629-4.

Li H, Thrash A, Tang JD, He L, Yan J, Warburton ML. Leveraging GWAS data to identify metabolic pathways and networks involved in maize lipid biosynthesis. The Plant Journal. 2019. doi:10.1111/tpj.14282.

Grover CE, Arick II MA, Thrash A, Conover JL, Sanders WS, Peterson DG, et al. Insights into the Evolution of the New World Diploid Cottons ( Gossypium , Subgenus Houzingenia ) Based on Genome Sequencing. Genome Biology and Evolution. 2019;11:53–71. doi:10.1093/gbe/evy256

2018

Thrash A. Keanu: An Interactive Tool for Exploring Sample Content. Presentation, 15th Annual Conference of the Midsouth Computational Biology & Bioinformatics Society (Starkville, MS).

Thrash A, Arick II M, Peterson DG. Quack: A Tool for Rapid FASTQ Quality Assurance. Poster, 15th Annual Conference of the Midsouth Computational Biology & Bioinformatics Society (Starkville, MS).

Thrash A, Hoffmann F, Perkins A. A Machine Learning Approach to Genome Assessment. Poster, 15th Annual Conference of the Midsouth Computational Biology & Bioinformatics Society (Starkville, MS).

Warburton ML, Womack ED, Tang JD, Thrash A, Smith JS, Xu W, et al. Genome-Wide Association and Metabolic Pathway Analysis of Corn Earworm Resistance in Maize. The Plant Genome. 2018;11:0.

Thrash A, Arick II M, Peterson DG. Quack: A quality assurance tool for high throughput sequence data. Analytical Biochemistry. 2018;548:38–43. doi:10.1016/j.ab.2018.01.028

2017

Grover CE, Arick II MA, Conover JL, Thrash A, Hu G, Sanders WS, et al. Comparative Genomics of an Unusual Biogeographic Disjunction in the Cotton Tribe (Gossypieae) Yields Insights into Genome Downsizing. Genome Biology and Evolution. 2017;9:3328–44.

Thrash A, Showmaker K, Peterson DG. SoyLENT: Visualizing Soybean Pedigrees. Poster, 14th Annual Conference of the Midsouth Computational Biology & Bioinformatics Society (Little Rock, AR)

2016

Thrash A, Perkins A. Performance of Probabilistically Assigning Sequence Reads in Metatranscriptomic Studies Using Gene Expression. Poster, 13th Annual Conference of the Midsouth Computational Biology & Bioinformatics Society (Memphis, TN)

Thrash A. Update on the MCBIOS Timber Rattlesnake Genome Project. Presentation, 13th Annual Conference of the Midsouth Computational Biology & Bioinformatics Society (Memphis, TN)

2015

Rice J, Dees K, Thrash A, Perkins A. Investigating genome similarity through cross mapping percentage. In: Proceedings of the 6th ACM Conference on Bioinformatics, Computational Biology and Health Informatics - BCB ’15. Atlanta, Georgia: ACM Press; 2015. p. 543–4. doi:10.1145/2808719.2811456.

Thrash A, Perkins A. Accurately Assigning Sequence Reads in Metatranscriptomic Studies. Poster, 12th Annual Conference of the Midsouth Computational Biology & Bioinformatics Society (Little Rock, AR)

Thrash A. Metagenomics and Mississippi. Poster, Research Day @ the Capitol (Jackson, MS)

2014

Thrash A, Perkins A. Probabilistic Assignment Of High Throughput Sequence Data In Metatranscriptomic Studies. Poster, 11th Annual Conference of the Midsouth Computational Biology & Bioinformatics Society (Stillwater, OK)

Thrash A. Metagenomics and Mississippi. Poster, Research Day @ the Capitol (Jackson, MS)